Information for 21-CCACAATAAACGT (Motif 28)

A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G C T A G C T A G C T C T G A C G A T A C G T A C T G C G A T A C T G C T A G
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.840
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 22.9bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCACAATAAACGT
-GACAATGNN---
 A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCACAATAAACGT
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCACAATAAACGT
TCACGGAACAATAGGTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCACAATAAACGT
CTCACACAATGGCGC-
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCACAATAAACGT-
TGCCAAAATAAACANN
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCACAATAAACGT
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCACAATAAACGT
AATGAACAATGGAATT
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACAATAAACGT
NAAACCACAG-------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACAATAAACGT
ATCCAC---------
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCACAATAAACGT
NNNNNGAACAATTGANN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A C G T A A G C T T C G A C T G A C T G A G T A C C T A G A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T