Information for 17-SATTAAAGTTCACTCT (Motif 24)

A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C G T A T C G G C T A C G T A A T G C G A C T A C G T A C G T C T G A C G T A C A G T A T C G
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.737
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.6 +/- 16.4bp
Average Position of motif in Background51.4 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SATTAAAGTTCACTCT
GGCAAAAGTCCAATAA
 A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SATTAAAGTTCACTCT
GGGGTCAAAGTCCAAT--
 A C G T A C G T A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:SATTAAAGTTCACTCT
TCTCAAAGGTCACCTG
 A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----SATTAAAGTTCACTCT
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SATTAAAGTTCACTCT
-ATTAAA---------
 A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---SATTAAAGTTCACTCT
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--SATTAAAGTTCACTCT
GGGGTCAAAGGTCA----
 A C G T A C G T A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:SATTAAAGTTCACTCT--
-NTNTATGTGCACATNNN
 A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--SATTAAAGTTCACTCT
GGGGTCAAAGGTCA----
 A C G T A C G T A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--SATTAAAGTTCACTCT
GGGGTCAAAGGTCA----
 A C G T A C G T A T G C G C T A C G A T A G C T C G T A G T C A C G T A A T C G A C G T C A G T A T G C C G T A A G T C G A C T T A G C C G A T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T