Information for 9-ATTCTTTCTGCCACMW (Motif 18)

C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
Reverse Opposite:
C G T A A C T G A T C G G A C T C T A G A C T G A T G C C G T A A C T G C G T A G T C A G T C A T A C G C G T A C T G A A C G T
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.777
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.8 +/- 19.9bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATTCTTTCTGCCACMW
---CTGTCTGTCACCT
 C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATTCTTTCTGCCACMW
----TGTCTGDCACCT
 C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATTCTTTCTGCCACMW
ATTGTTA---------
 C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTCTTTCTGCCACMW
TTTTTTTTCNNGTN---
 A C G T C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTCTTTCTGCCACMW
ATTGTT----------
 C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ATTCTTTCTGCCACMW
NNATNAATTGTTTNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATTCTTTCTGCCACMW
NCCATTGTTY---------
 A C G T A C G T A C G T C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATTCTTTCTGCCACMW
ATTGTTTAN-------
 C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.55
Offset:-9
Orientation:reverse strand
Alignment:---------ATTCTTTCTGCCACMW
TNNANNTCTATTGTTNTNNANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATTCTTTCTGCCACMW
CCATTGTTYB--------
 A C G T A C G T C G T A A G C T A C G T A T G C C A G T A C G T A C G T A G T C C G A T A T C G T A G C G A T C C G T A A T G C G T A C C G A T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T