Information for 3-GCCTTCACCTCTG (Motif 4)

A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G
Reverse Opposite:
T A G C C G T A A T C G G C T A A C T G A C T G C A G T A C T G C T G A T G C A C T A G A C T G T G A C
p-value:1e-14
log p-value:-3.283e+01
Information Content per bp:1.767
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif46.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.3 +/- 22.8bp
Average Position of motif in Background52.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTCACCTCTG
TGACCTTGACCT---
 A C G T A C G T A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCCTTCACCTCTG
CNNTTGACCTTTG
 A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTCACCTCTG
TGACCTTGACCT---
 A C G T A C G T A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTCACCTCTG---
NNNNTTGACCCCTNNNN
 A C G T A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTCACCTCTG-
NNGGCGACACCTCNNN
 A C G T A C G T A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCCTTCACCTCTG
----TGACCYCT-
 A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTTCACCTCTG---
NNNNTGACCTTTNNNN
 A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTTCACCTCTG------
----TGACCTTTGCCCTAN
 A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCCTTCACCTCTG--
-----AACATCTGGA
 A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTTCACCTCTG-----
----TGACCTTTGCCCTA
 A C T G G T A C G A T C A C G T A G C T T G A C G C T A A G T C G T A C C G A T T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A