Information for 4-CTAGAGGGCACTG (Motif 4)

A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G G A C T C T A G A T G C A T G C A G T C A C G T G T A C C A G T T C G A A C T G
p-value:1e-12
log p-value:-2.895e+01
Information Content per bp:1.786
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.9 +/- 24.0bp
Average Position of motif in Background37.6 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CTAGAGGGCACTG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTAGAGGGCACTG----
---NAGGTCANTGACCT
 A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTAGAGGGCACTG
---AAGGTCAC--
 A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAGAGGGCACTG
--TRAGGTCA---
 A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTAGAGGGCACTG-------
---AATCGCACTGCATTCCG
 A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTAGAGGGCACTG----
NNNNTGAGCACTGTNNG
 A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTAGAGGGCACTG---
----RGGGCACTAACY
 A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTAGAGGGCACTG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTAGAGGGCACTG---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTAGAGGGCACTG
--AGRGGTCA---
 A G T C A G C T G C T A A C T G G T C A A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C T G
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T