Information for 4-TGTGTGACBCTHHCCT (Motif 5)

A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
Reverse Opposite:
C T G A C T A G A C T G C A T G C T G A C G T A A T C G T C G A A C T G A C G T G T A C C G T A A T G C C T G A A T G C G T C A
p-value:1e-12
log p-value:-2.815e+01
Information Content per bp:1.756
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 25.2bp
Average Position of motif in Background49.0 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGTGTGACBCTHHCCT
----TGACCTTTNCNT
 A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACBCTHHCCT
AGGTGTGA---------
 A C G T A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTGACBCTHHCCT--
AGTAGGTCACNGTGACCTAC
 A C G T A C G T A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACBCTHHCCT
AGGTGTGA---------
 A C G T A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGTGTGACBCTHHCCT
----TGACCTTGACCT
 A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACBCTHHCCT
AGGTGTGA---------
 A C G T A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACBCTHHCCT
AGGTGTGA---------
 A C G T A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTGTGACBCTHHCCT
-NCGTGACN-------
 A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGTGACBCTHHCCT
TGTCTGDCACCT----
 A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACBCTHHCCT
AGGTGTGAAM-------
 A C G T A C G T A T C G A G C T T A C G C G A T A C T G C G T A A G T C A G C T A T G C C G A T G A C T G A T C A G T C A G T C A G C T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T