Information for 16-TCATTGAGTGTGT (Motif 42)

A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.938
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 20.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCATTGAGTGTGT
--CTTGAGTGGCT
 A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCATTGAGTGTGT
---TTGAGTGSTT
 A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCATTGAGTGTGT
---TTRAGTGSYK
 A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCATTGAGTGTGT--
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTGAGTGTGT
NNCATTCATTCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCATTGAGTGTGT
--BTBRAGTGSN-
 A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCATTGAGTGTGT
---TTAAGTGCTT
 A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCATTGAGTGTGT------
---NNGCGTGTGTGCNGCN
 A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCATTGAGTGTGT-----
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCATTGAGTGTGT
NANTTCATTGAATTA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G A T A C G T A C T G C G T A A C T G A C G T A C T G G C A T A T C G A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T