Information for 18-KGCWKKYBCTCAAACT (Motif 33)

A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T
Reverse Opposite:
C T G A A T C G C G A T C A G T C G A T A T C G C G T A A C T G T C A G T C G A T G C A G T A C G C T A T C A G G T A C T G C A
p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.664
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets66.8 +/- 16.9bp
Average Position of motif in Background47.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:KGCWKKYBCTCAAACT-
-------ACTGAAACCA
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:KGCWKKYBCTCAAACT-
-------TTTGAAACCG
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:KGCWKKYBCTCAAACT
--NNTNTCATGAATGT
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T
A C G T A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:KGCWKKYBCTCAAACT
----GGCCATAAATCA
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:KGCWKKYBCTCAAACT
GSCTGTCACTCA----
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:KGCWKKYBCTCAAACT
--------ATTAAA--
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:KGCWKKYBCTCAAACT---
--TCACCCATCAATAAACA
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:KGCWKKYBCTCAAACT-
---------TCACACCT
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:KGCWKKYBCTCAAACT
-NCTGTCAATCAN---
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:KGCWKKYBCTCAAACT-
---------TCACACCT
 A C G T A C T G A G T C C G A T C A T G A C G T A G C T A G T C G T A C A C G T A T G C C G T A G T C A G C T A A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T