Information for 9-AGGTGGCAGCATTGKC (Motif 13)

C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
Reverse Opposite:
A T C G T G A C G A T C T C G A G T C A C A G T A C T G A G T C A G C T A C T G A G T C G A T C T G C A T A G C A G T C A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.682
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif55.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.6 +/- 26.2bp
Average Position of motif in Background46.1 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGTGGCAGCATTGKC
AGGTGTCA--------
 C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGTGGCAGCATTGKC
ADGGYAGYAGCATCT--
 A C G T C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGTGGCAGCATTGKC
AGGAAACAGCTG----
 C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGGCAGCATTGKC
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------AGGTGGCAGCATTGKC
TGGCCACCAGGTGGCACTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGTGGCAGCATTGKC
-TGAGTCAGCA-----
 C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGTGGCAGCATTGKC
-VBTGWCAGCB-----
 C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------AGGTGGCAGCATTGKC
TGGCCACCAGGGGGCGCTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGTGGCAGCATTGKC
ARNTGACA--------
 C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGGTGGCAGCATTGKC
------CAGCC-----
 C G T A C T A G A C T G A C G T C T A G T C A G G T A C C T G A T A C G A G T C G T C A A C G T A G C T C T A G A C T G T A G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T