Information for 2-GRRRCCTAAMCCT (Motif 10)

A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G C T A G T C A G T C
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.4 +/- 26.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GRRRCCTAAMCCT
----GCTAATCC-
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GRRRCCTAAMCCT---
-----CTAATCCTCTT
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GRRRCCTAAMCCT-
----NYTAATCCYB
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GRRRCCTAAMCCT-
------TAATCCCN
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GRRRCCTAAMCCT
----CTTAATCCC
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GRRRCCTAAMCCT
TCGAAACCGAAACT-
 A C G T A C G T A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GRRRCCTAAMCCT-----
-NNNATTAATCCGNTTNA
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GRRRCCTAAMCCT-----
-NNNATTAATCCGNTTNA
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GRRRCCTAAMCCT-
----GCTAATCCCC
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GRRRCCTAAMCCT
-----YTAATCCY
 A C T G C T A G C T G A C T A G A G T C A G T C A G C T G T C A C G T A G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C