Information for 5-AAAAGGCCAGCAG (Motif 6)

C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A G T C A G C T A T C G A C T G A G T C G A T C C A G T A C G T C A G T G C A T
p-value:1e-14
log p-value:-3.341e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.9 +/- 23.4bp
Average Position of motif in Background79.9 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGCCAGCAG-
ATAAAGGCGCGCGAT
 A C G T C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGCCAGCAG-
ATAAGGGCGCGCGAT
 A C G T C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGCCAGCAG
GGGRAARRGRMCAGMTG
 A C G T A C G T A C G T A C G T C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AAAAGGCCAGCAG---
------CCAGCTGTTN
 C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGGCCAGCAG
ANGNAAAGGTCA----
 A C G T A C G T A C G T C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAAAGGCCAGCAG
TAATGGCGGNC--
 C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAAAGGCCAGCAG
-------CAGCC-
 C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAAAGGCCAGCAG
--AAGGCAAGTGT
 C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AAAAGGCCAGCAG--
-------CAGCTGNT
 C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGCCAGCAG
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C G T A G C T A C G T A G C T A C T A G C T A G A G T C A T G C C T G A A C T G A G T C C T G A A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G