Information for 16-ARGGTAAATC (Motif 25)

C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A C A G T A C G T A C G T T G C A G T A C G T A C A G C T C G A T
p-value:1e-8
log p-value:-1.963e+01
Information Content per bp:1.775
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif31.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets45.1 +/- 31.9bp
Average Position of motif in Background53.3 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ARGGTAAATC--
--GGAAATTCCC
 C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ARGGTAAATC----
----CAAATCACTG
 C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ARGGTAAATC-
CAGGTAAGTAT
 C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ARGGTAAATC--
--GGAAATTCCC
 C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ARGGTAAATC------
AAGGCGAAATCATCGCA
 A C G T C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ARGGTAAATC--
--GGAAATCCCC
 C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ARGGTAAATC--
NGGGGATTTCCC
 C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ARGGTAAATC
NATGGAAAAN-
 A C G T C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ARGGTAAATC--
--GGAAANCCCC
 C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ARGGTAAATC--
TTGAATGAAATTCGA
 A C G T A C G T A C G T C G T A C T G A A C T G A C T G A C G T C G T A T G C A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A