Information for 23-ACTAGGMAAGTGC (Motif 41)

T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C
Reverse Opposite:
A C T G A T G C C G T A G A T C A C G T C G A T A C G T A G T C G T A C A G C T C G T A A C T G A G C T
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.715
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif44.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets39.4 +/- 28.4bp
Average Position of motif in Background50.3 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ACTAGGMAAGTGC
--AAGGCAAGTGT
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACTAGGMAAGTGC-
----GGAAATTCCC
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTAGGMAAGTGC
--CAGGTAAGTAT
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACTAGGMAAGTGC
-----TTAAGTGC
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTAGGMAAGTGC
AAAGRGGAAGTG-
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACTAGGMAAGTGC-
----GGAAATTCCC
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACTAGGMAAGTGC-
----NTCAAGTGGN
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACTAGGMAAGTGC--
-----TTAAGTGCTT
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTAGGMAAGTGC
TAACGACACGTGC
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ACTAGGMAAGTGC-
-----TTAAGTGGN
 T C G A T A G C G A C T C T G A A C T G C T A G T G C A C G T A C G T A C A T G C G A T A T C G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T