Information for 13-TGTGGGCAGC (Motif 39)

A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
Reverse Opposite:
A T C G G T A C A C G T T C A G T G A C G A T C G T A C C G T A T G A C G T C A
p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.821
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif201.0
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets52.2 +/- 29.2bp
Average Position of motif in Background50.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGTGGGCAGC
TNNGGGCAG-
 A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGTGGGCAGC
NGTGGGCAT-
 A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGGCAGC
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGGCAGC---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTGGGCAGC
NGCGTGGGCGGR
 A C G T A C G T A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TGTGGGCAGC-
------CAGCC
 A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTGGGCAGC
WDNCTGGGCA--
 A C G T A C G T A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGGGCAGC-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTGGGCAGC
GTCTGTGGTTT--
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTGGGCAGC
GGTTGGCAT-
 A C G T A C T G C G A T A C T G C A T G A C T G A G T C C G T A A C T G A T G C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T