Information for 23-AGAATGTAAATAC (Motif 39)

C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C
Reverse Opposite:
A T C G A C G T C T G A A C G T A C G T A C G T C G T A G T A C C G T A C G A T A C G T A T G C A C G T
p-value:1e-7
log p-value:-1.765e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 16.8bp
Average Position of motif in Background55.1 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGAATGTAAATAC
--TATGTAAATAT
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AGAATGTAAATAC
--AAAGTAAACA-
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGAATGTAAATAC
--TATGTAAATAT
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGAATGTAAATAC
--AAAGTAAACA-
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGAATGTAAATAC--
NCWRWGTAAACANSV
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGAATGTAAATAC---
-CAAAGTAAACANNNN
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGAATGTAAATAC----
AAAATGTAAACAAACAG
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGAATGTAAATAC----
AAAATGTAAACAAACAG
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGAATGTAAATAC----
AAAAAGTAAACAAAGAC
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGAATGTAAATAC
NCTAAGTAAACA-
 C G T A A T C G C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A A G C T C G T A A T G C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T