Information for 15-AACTCTCCTTGCT (Motif 28)

C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A C G T A C G T
p-value:1e-7
log p-value:-1.715e+01
Information Content per bp:1.947
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 31.8bp
Average Position of motif in Background53.0 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AACTCTCCTTGCT
-ACTTTCGTTTCT
 C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AACTCTCCTTGCT
NNAATTCTCGNTNAN
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AACTCTCCTTGCT---
----CCCCCTGCTGTG
 C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AACTCTCCTTGCT
-BNTGDCCTTG--
 C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AACTCTCCTTGCT------
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AACTCTCCTTGCT-----
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AACTCTCCTTGCT
AAGATATCCTT---
 A C G T C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AACTCTCCTTGCT--
-NNGCACCTTTCTCC
 C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-AACTCTCCTTGCT
NNACTTACCTN---
 A C G T C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-AACTCTCCTTGCT
NNACTTGCCTT---
 A C G T C G T A C G T A A G T C A C G T A G T C A C G T G T A C A G T C C G A T A C G T A T C G A G T C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T