Information for 9-AAAWDACTGAAVMCAG (Motif 12)

G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C G T C A G T A G C T T G A C C G T A A C T G C A G T G T C A C G A T A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.140e+01
Information Content per bp:1.678
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif178.3
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets48.8 +/- 21.0bp
Average Position of motif in Background48.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAWDACTGAAVMCAG---
--ATAAATGACACCTATCA
 G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G A C G T A C G T A C G T
A C G T A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PH0149.1_Pou3f4/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAAWDACTGAAVMCAG
AATTAATTAATTAATTC--
 A C G T A C G T A C G T G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C A C G T A C G T

PH0142.1_Pou1f1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAWDACTGAAVMCAG
GATTAATTAATTAAGTC--
 A C G T A C G T A C G T G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C A C G T A C G T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAWDACTGAAVMCAG
AGTAATTAATTACTTC--
 A C G T A C G T G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAWDACTGAAVMCAG
GCGAACTAATTAATGC--
 A C G T A C G T G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AAAWDACTGAAVMCAG
-----ACTGAAACCA-
 G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAAWDACTGAAVMCAG-
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAAWDACTGAAVMCAG
-AATTATT--------
 G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAAWDACTGAAVMCAG
AGTTATTAATGAGGTC--
 A C G T A C G T G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C A C G T A C G T

PH0088.1_Isl2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAAWDACTGAAVMCAG
CAAAATCAATTAATTT--
 A C G T A C G T G T C A C G T A C G T A C G T A C A G T G T C A T G A C A C G T A C T G C T G A G T C A T G C A G T C A A G T C G T C A T C A G
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T A C G T A C G T