Information for 11-AAGCAGCTTGAAAAAM (Motif 8)

C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C G T C G A T G T A C C T G A C G T A C T A G G T A C C G A T A C T G G T A C A C G T A C G T
p-value:1e-14
log p-value:-3.283e+01
Information Content per bp:1.764
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 23.0bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAGCAGCTTGAAAAAM--
----TACTGGAAAAAAAA
 C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGCAGCTTGAAAAAM
---CGGTTTCAAA---
 C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AAGCAGCTTGAAAAAM
-----GCTCGTAAAAA
 C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAGCTTGAAAAAM---
GAAGTANCACGAATNMRAGT
 A C G T C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AAGCAGCTTGAAAAAM------
-----GTTAAAAAAAAAAATTA
 C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAGCTTGAAAAAM
BAGTCATANTGAAAG--
 A C G T C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGCAGCTTGAAAAAM
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AAGCAGCTTGAAAAAM------
-----GTTCAAAAAAAAAATTC
 C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AAGCAGCTTGAAAAAM--
--AAAGCTCGTAAAATTT
 C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C A C G T A C G T
A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AAGCAGCTTGAAAAAM
AACTAGCTGTCAATAC
 C G T A G T C A A C T G A G T C C G T A A C T G A G T C G A C T A G C T C A T G G C T A C G T A G T C A G T C A G T C A G T A C
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C