Information for 19-CTGCTGAAGT (Motif 39)

A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.272e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.8 +/- 21.2bp
Average Position of motif in Background53.5 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGAAGT
AATTTGCTGAC--
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGCTGAAGT-
-AGCGGAAGTG
 A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T A C G T
A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGAAGT
AAAATGCTGACT-
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGAAGT-
AAAWWTGCTGACWWD
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGAAGT--
AAANTGCTGACTNAG
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTGCTGAAGT--
---NTCAAGTGG
 A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGCTGAAGT---
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGCTGAAGT-
-TGCTGACTCA
 A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGAAGT
ANCAGCTG----
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGAAGT
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T