Information for 20-TGGCWGASAAATWTTY (Motif 24)

C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
Reverse Opposite:
T C G A G T C A T C G A C G T A C T G A A C G T A G C T C G A T A T C G C A G T A G T C C G A T A C T G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.657
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif107.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets53.2 +/- 25.7bp
Average Position of motif in Background49.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGCWGASAAATWTTY
-GRAASTGAAAST---
 C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGCWGASAAATWTTY
AGGTGNCAGACAG------
 A C G T A C G T A C G T C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGCWGASAAATWTTY
AGGTGHCAGACA-------
 A C G T A C G T A C G T C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGCWGASAAATWTTY
TGAGTGACAGSC----
 C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGCWGASAAATWTTY
NTGATTGACAGN-----
 A C G T C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGCWGASAAATWTTY
-GAAACTGAAACT---
 C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGCWGASAAATWTTY
BTGABTGACAGS-----
 A C G T C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGCWGASAAATWTTY
-GGAAGTGAAAST---
 C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TGGCWGASAAATWTTY
-GAAAMTGAAACT---
 C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGGCWGASAAATWTTY
-GAAAGTGAAAGT---
 C G A T A C T G T C A G G T A C C G T A T C A G G T C A T A G C C G T A C T G A T G C A G A C T G C A T A G C T A C G T A G C T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T