Information for 5-CGTAACCACA (Motif 13)

T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A
Reverse Opposite:
G A C T T A C G C G A T T A C G C T A G A G C T G A C T C G T A G A T C A C T G
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.688
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif9.24%
Number of Background Sequences with motif1577.9
Percentage of Background Sequences with motif3.46%
Average Position of motif in Targets49.1 +/- 25.7bp
Average Position of motif in Background49.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CGTAACCACA-
-NAAACCACAG
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:CGTAACCACA--
--AAACCACAGC
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.88
Offset:2
Orientation:forward strand
Alignment:CGTAACCACA--
--AAACCACANN
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.88
Offset:1
Orientation:forward strand
Alignment:CGTAACCACA---
-NWAACCACADNN
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:CGTAACCACA---
--AAACCACAGAN
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CGTAACCACA-
--AAACCGCAA
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CGTAACCACA--
--AAACCGCAAA
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGTAACCACA
---ATCCAC-
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGTAACCACA
-GTAAACA--
 T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A
A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGTAACCACA-
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T T G A C C T A G G C A T C T G A T C G A G A T C A T G C G C T A A T G C C T G A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G