Information for 8-YKCAGCCAAGATSMMY (Motif 9)

A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
Reverse Opposite:
C T G A A C T G A C G T A T C G C G T A A C G T A T G C A C G T A C G T A C T G A C T G A G T C A C G T A C T G G T C A C T A G
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.4 +/- 18.8bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YKCAGCCAAGATSMMY
-BCAGACWA-------
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:YKCAGCCAAGATSMMY
---TGCCAA-------
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YKCAGCCAAGATSMMY
-CGTGCCAAG------
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YKCAGCCAAGATSMMY---
---TGCCAAAATAAACANN
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:YKCAGCCAAGATSMMY
--AAGATAAGATAACA
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YKCAGCCAAGATSMMY
-GGTGCCAAGT-----
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YKCAGCCAAGATSMMY
--CAGCC---------
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YKCAGCCAAGATSMMY
----BTCAAGGTCA--
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YKCAGCCAAGATSMMY
--AAGGCAAGTGT---
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YKCAGCCAAGATSMMY---
--TATTCAAGGTCATGCGA
 A G T C C A G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A T C G C G T A A C G T A T G C G T C A T G A C G A C T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A