Information for 19-AGGSCCMTAT (Motif 34)

C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T
Reverse Opposite:
C G T A A C G T G T C A A C T G C A T G T C A G A T C G A T G C A G T C G A C T
p-value:1e-6
log p-value:-1.400e+01
Information Content per bp:1.732
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif273.7
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets50.9 +/- 33.9bp
Average Position of motif in Background47.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGSCCMTAT--
AGGTCTCTAACC
 C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGSCCMTAT
CTAGGCCT----
 A C G T A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGSCCMTAT-----
NTCNTCCCCTATNNGNN
 A C G T A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGGSCCMTAT--
ARGAGGMCAAAATGW
 A C G T A C G T A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGSCCMTAT
CNAGGCCT----
 A C G T A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGSCCMTAT
CAAGGHCANV--
 A C G T A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGSCCMTAT
AAGGTCAC---
 A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGGSCCMTAT--
----CCATATGT
 C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGGSCCMTAT
NRRGGGTCTT--
 A C G T A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGGSCCMTAT
TRAGGTCA----
 A C G T A C G T C T G A A C T G T A C G A T G C A G T C G T A C G T A C C A G T G T C A C G A T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T