Information for 18-ATGGGTGGCTGAG (Motif 28)

C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C T G G T A C A G T C C G T A A G T C A G T C A G T C C G T A A C G T
p-value:1e-7
log p-value:-1.696e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 28.0bp
Average Position of motif in Background66.5 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGGGTGGCTGAG
GTCATGCHTGRCTGS-
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGGGTGGCTGAG
NGTCACGCTTGGCTGC-
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGGGTGGCTGAG
-TGCGTGGGYG--
 C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ATGGGTGGCTGAG
----TWGTCTGV-
 C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGGGTGGCTGAG-
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGTGGCTGAG
CTTGAGTGGCT---
 A C G T C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATGGGTGGCTGAG
--GGATGACTCAT
 C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATGGGTGGCTGAG
--GGATGACTCAT
 C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATGGGTGGCTGAG
TTCGGTGGTCGC-
 C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATGGGTGGCTGAG
NTCGGTGGTCGC-
 C G T A A C G T A C T G A C T G C T A G A C G T A C T G C A T G A G T C A C G T A C T G C G T A C T A G
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T