Information for 4-CWGTCTGCTT (Motif 18)

A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T
Reverse Opposite:
C T G A C T G A A C T G G T A C C G T A C A T G C T G A G T A C C G A T C T A G
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.694
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif423.1
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets43.3 +/- 24.8bp
Average Position of motif in Background49.8 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CWGTCTGCTT
TWGTCTGV--
 A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CWGTCTGCTT
CTGTCTGG--
 A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CWGTCTGCTT
VBSYGTCTGG--
 A C G T A C G T A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CWGTCTGCTT---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CWGTCTGCTT--
----TTGATTGN
 A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CWGTCTGCTT
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CWGTCTGCTT
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CWGTCTGCTT------
NSTGTTTRCWCAGBNNN
 A C G T A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CWGTCTGCTT--
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CWGTCTGCTT-
CTTTCANTATGACTV
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G G A C T G T A C A C G T A C T G G T A C G A C T A G C T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C