Information for 8-GKTCTCKGRGCTY (Motif 8)

A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C
Reverse Opposite:
C T A G C G T A A T C G A G T C A G C T A G T C G T C A A C T G C G T A A C T G C G T A G T C A G T A C
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.874
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.9 +/- 24.6bp
Average Position of motif in Background53.7 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Vdr/MA0693.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GKTCTCKGRGCTY-
GAGTTCATTGAGTTCA
 A C G T A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C A C G T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GKTCTCKGRGCTY
--WDNCTGGGCA-
 A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GKTCTCKGRGCTY----
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GKTCTCKGRGCTY-
GGGTCAACGAGTTCA
 A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GKTCTCKGRGCTY--
TGGACTTTGNNCTNTG
 A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GKTCTCKGRGCTY
-----CGGAGC--
 A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GKTCTCKGRGCTY-
TGGACTTTGNNCTCN
 A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GKTCTCKGRGCTY
AGGTCTCTAACC--
 A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GKTCTCKGRGCTY
AGGTCANTGACCTN
 A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GKTCTCKGRGCTY
--------NGCTN
 A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C T G A A C T G A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G