Information for 16-GAATCAABGCAAG (Motif 38)

C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A C T G A G T C T A G C A C G T A C G T A C T G C G T A A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.8 +/- 7.6bp
Average Position of motif in Background49.5 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GAATCAABGCAAG---
-----AAGGCAAGTGT
 C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAATCAABGCAAG--
ACTATGAATGAATGAT
 A C G T C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAATCAABGCAAG
HNRAATCAAT-----
 A C G T A C G T C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAATCAABGCAAG-
--AGAAACGAAAGT
 C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAATCAABGCAAG
AAATCACTGC---
 C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAATCAABGCAAG
CAAATCACTG----
 A C G T C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAATCAABGCAAG
SSAATCCACANN--
 A C G T C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAATCAABGCAAG
AAATCACAGCA--
 C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAATCAABGCAAG
CCAATCAA------
 A C G T C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAATCAABGCAAG
TCCAATCCACA----
 A C G T A C G T C T A G C G T A C G T A A C G T T G A C G T C A C G T A A C T G A C T G G T A C C G T A C G T A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T