Information for 18-TACATATGAAAAGCAG (Motif 29)

C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
Reverse Opposite:
A G T C A G C T T C A G G T A C C G A T G A C T A C G T A C G T G T A C C G T A C G A T C G T A C G A T A C T G C G A T C G T A
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.708
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif24.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.9 +/- 27.7bp
Average Position of motif in Background45.5 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TACATATGAAAAGCAG
-AAATAAGAAAAAAC-
 C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TACATATGAAAAGCAG
AATATACATGTAAAACA---
 A C G T A C G T A C G T A C G T C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TACATATGAAAAGCAG
ATTTGCATAACAAAG----
 A C G T A C G T A C G T C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TACATATGAAAAGCAG
AAAATACATGTAAAAAT---
 A C G T A C G T A C G T A C G T C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TACATATGAAAAGCAG
AAAATACATGTAATACT---
 A C G T A C G T A C G T A C G T C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TACATATGAAAAGCAG
AATATACATGTAAAATT---
 A C G T A C G T A C G T A C G T C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TACATATGAAAAGCAG
-----ATTAAA-----
 C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TACATATGAAAAGCAG
AATATACATGTAATATA---
 A C G T A C G T A C G T A C G T C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TACATATGAAAAGCAG
ATTTGCATAACAATG----
 A C G T A C G T A C G T C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TACATATGAAAAGCAG
-NCYAATAAAA-----
 C G A T C G T A A G T C C G T A G C A T G C T A C G A T A C T G C G T A G T C A C G T A C G T A A C T G A G T C T C G A T A C G
A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T