Information for 3-ACAAAGCCCA (Motif 27)

G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
Reverse Opposite:
C A G T C A T G C A T G A T C G T A G C C G A T A C G T G C A T A C T G C G A T
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.651
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif9.35%
Number of Background Sequences with motif2011.0
Percentage of Background Sequences with motif4.10%
Average Position of motif in Targets50.1 +/- 25.0bp
Average Position of motif in Background50.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ACAAAGCCCA
ACAAAG----
 G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----ACAAAGCCCA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCCA
VRRACAAWGG---
 A C G T A C G T A C G T G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGCCCA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACAAAGCCCA----
GGCAAAAGTCCAATAA
 A C G T A C G T G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCCA
GGAACAAAGR---
 A C G T A C G T A C G T G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCCA
AAAACAAAGG---
 A C G T A C G T A C G T G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACAAAGCCCA--
ACAAAGGNBCCT
 G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGCCCA
RACAAWGG---
 A C G T G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACAAAGCCCA-
-CAAAGGTCAG
 G C T A T G A C C G T A T G C A G C T A A T C G T A G C G T A C G T A C G T C A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G