Information for 17-CCATCTAAAGGAATGG (Motif 26)

A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C A G T A G C T G T A C G T A C G A C T A C G T A C G T G T C A T C A G C T G A C G A T C T A G C T A G
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.749
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.8 +/- 28.2bp
Average Position of motif in Background62.2 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCATCTAAAGGAATGG
----CTAATKGV----
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCATCTAAAGGAATGG
TTCCATATATGGAA----
 A C G T A C G T A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T A C G T A C G T A C G T

PH0088.1_Isl2/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCATCTAAAGGAATGG-
-AAATTAATTGATTTNG
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G A C G T
A C G T C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CCATCTAAAGGAATGG-----
---------TGATTGGCTANN
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CCATCTAAAGGAATGG-
-------NTGGAATGTG
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCATCTAAAGGAATGG
---GCTAATTGCT---
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCATCTAAAGGAATGG
CCATATATGGNA----
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CCATCTAAAGGAATGG
-----TAATTGATTA-
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

SRF/MA0083.3/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCATCTAAAGGAATGG
TGACCATATATGGTCA---
 A C G T A C G T A C G T A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCATCTAAAGGAATGG
----NTAATKGTTT--
 A G T C A G T C G C T A A G C T A G T C A C G T C G T A C G T A C G T A A C T G A C T G C T G A G C T A C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T