Information for 16-AAAGGATACATTGKTT (Motif 24)

C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
Reverse Opposite:
G T C A G C T A G T A C A T G C C G T A C T G A A C G T A T C G A C G T G C T A A C G T A G T C A G T C A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 19.2bp
Average Position of motif in Background51.8 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGGATACATTGKTT
AAAGTAAACA------
 C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGGATACATTGKTT
AAAGTAAACA------
 C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAGGATACATTGKTT
-NTTGATACATT----
 C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGATACATTGKTT
CAAAGTAAACANNNN--
 A C G T C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAGGATACATTGKTT
-AAGGATATNTN----
 C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAGGATACATTGKTT
WAAGTAAAYA------
 C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAGGATACATTGKTT
TAAGTAAACAAA----
 C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGATACATTGKTT
NCTAAGTAAACA------
 A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGGATACATTGKTT
AAAAAGTAAACAAAGAC-
 A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGGATACATTGKTT
CAAAAGTAAACAAAG---
 A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A C A G T C G T A A T G C C G T A G A C T G A C T A T C G C A T G C A G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T