Information for 2-CTTTATKSAGAASAAT (Motif 2)

A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T
Reverse Opposite:
C T G A C G A T A C G T A T C G A C G T A C G T A G T C A C G T A T G C T G A C C G T A C A G T C T G A G C T A C G T A C T A G
p-value:1e-14
log p-value:-3.281e+01
Information Content per bp:1.726
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 27.0bp
Average Position of motif in Background60.5 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTTTATKSAGAASAAT--
----NTTNAGAACAATTA
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTTATKSAGAASAAT
CATTTCCTGAGAAAT--
 A C G T A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTTTATKSAGAASAAT-----
-----TTAAGAACAATAAATT
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTTTATKSAGAASAAT-----
-----TTTAGAACAATAAAAT
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTTTATKSAGAASAAT----
----NNTNANAACAATTNNA
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTTATKSAGAASAAT
--TTCTNNAGAANT--
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTTTATKSAGAASAAT------
-----TAGTGAACAATAGATTT
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTTTATKSAGAASAAT------
-----TNNAGAACAATANATNN
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTTTATKSAGAASAAT
--TTCCKNAGAA----
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTTTATKSAGAASAAT---------
---AATAAAGAACAATAGAATTTCA
 A G T C G C A T C G A T A G C T G T C A A C G T A C T G A T C G C G T A C T A G G T C A C G T A T A G C G T C A G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A