Information for 1-TTCCAGGTCAARGAGG (Motif 1)

A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
Reverse Opposite:
A G T C A G T C C G A T A G T C G A T C G C A T G C A T A T C G T G C A G A T C A T G C A C G T A T C G A T C G T C G A C G T A
p-value:1e-16
log p-value:-3.764e+01
Information Content per bp:1.746
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 10.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
TTCAAGGTCAT-----
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG------
--NGAGGTCANNGAGTTCANNN
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
----AGGTCAAGGTCA
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
-TCAAGGTCATA----
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
ATCAAGGTCA------
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTCCAGGTCAARGAGG
-TCAAGGTCAN-----
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
BTCAAGGTCA------
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
NTCAAGGTCA------
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
-TCAAGGTCAT-----
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTCCAGGTCAARGAGG
--TRAGGTCA------
 A C G T A C G T A T G C A T G C G T C A A T C G C A T G A C G T A T G C C G T A C G T A C T A G T C A G C G T A C T A G C T A G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T