Information for 4-GAGRGAGGCTTCCHTC (Motif 5)

A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A A C T G A C T G C G T A C T G A A C T G A G T C A G T C A C G T A T G C A G C T A T G C A C G T A T G C
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.788
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 20.7bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GAGRGAGGCTTCCHTC
-------GCTTCC---
 A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGRGAGGCTTCCHTC
-----AGGCCTNG---
 A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GAGRGAGGCTTCCHTC
---CTAGGCCT-----
 A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GAGRGAGGCTTCCHTC
----CAAGCTT-----
 A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAGRGAGGCTTCCHTC
GGGCGGGAAGG-------
 A C G T A C G T A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GAGRGAGGCTTCCHTC
GGGGCCGAGGCCTG----
 A C G T A C G T A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GAGRGAGGCTTCCHTC
GGCGGGAARN-------
 A C G T A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GAGRGAGGCTTCCHTC
----GGGGATTCCCCC
 A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:GAGRGAGGCTTCCHTC-
-------ACTTCCTGBT
 A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:GAGRGAGGCTTCCHTC
--CAGCTGTTTCCT--
 A T C G G T C A A T C G T C A G A T C G C G T A C T A G A C T G A G T C A G C T C G A T A G T C T A G C G A C T A C G T A G T C
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T