p-value: | 1e-7 |
log p-value: | -1.645e+01 |
Information Content per bp: | 1.840 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.80% |
Number of Background Sequences with motif | 13.8 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 61.0 +/- 23.3bp |
Average Position of motif in Background | 39.1 +/- 23.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGGCAGAGTGTCG GTAGGTCACTGGGTCA |
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THAP1/MA0597.1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGGCAGAGTGTCG TNNGGGCAG------- |
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ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGCAGAGTGTCG-- GGTCANNGTGACCTN |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGGCAGAGTGTCG ---TTRAGTGSYK |
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ESR2/MA0258.2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGCAGAGTGTCG- AGGNCANNGTGACCT |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGCAGAGTGTCG-- TTGGCANNNTGCCAAG |
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Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGGCAGAGTGTCG RGKGGGCGGAGC---- |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGGCAGAGTGTCG-- ---BTGABTGACAGS |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGCAGAGTGTCG TAGGGCAAAGGTCA- |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGGCAGAGTGTCG GTAGGGCAAAGGTCA- |
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