Information for 19-CGYCCTSASWSTGKMY (Motif 31)

A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
Reverse Opposite:
C T A G A C G T G T A C A G T C C T G A A T G C G C A T A T C G A C G T A T C G C G T A A C T G A C T G C T G A A G T C C T A G
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.806
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.8 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGYCCTSASWSTGKMY-
BTGACCTCTNNHTGACCY
 A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGYCCTSASWSTGKMY
CTGCCCGCA--------
 A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CGYCCTSASWSTGKMY
ATGCCCTGAGGC-----
 A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGYCCTSASWSTGKMY
TGACCTYA--------
 A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CGYCCTSASWSTGKMY
GCGACCACACTG-----
 A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CGYCCTSASWSTGKMY
CAACGTCCGCGG-------
 A C G T A C G T A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CGYCCTSASWSTGKMY
GCCTCCTCCMTCWGACTGKS-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CGYCCTSASWSTGKMY
WTGSCCTSAGGS-----
 A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CGYCCTSASWSTGKMY
ACGTCATC---------
 A C G T A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CGYCCTSASWSTGKMY
CRCCCACGCA------
 A G T C A C T G A G C T A G T C A G T C A C G T A T G C C G T A A T G C C G T A A T C G A G C T A C T G A C T G G T C A A G T C
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T