Information for 7-GAGCWCTGTKTCA (Motif 19)

A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
Reverse Opposite:
C G A T A T C G G T C A G T C A C G T A G T A C C G T A A C T G C G A T A T C G A G T C A C G T T A G C
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.785
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.7 +/- 23.2bp
Average Position of motif in Background44.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCWCTGTKTCA
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCWCTGTKTCA
CAGCC--------
 A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGCWCTGTKTCA
--CCWTTGTYYB-
 A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGCWCTGTKTCA--
----AATGTATCAAT
 A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGCWCTGTKTCA
---CTTTGT----
 A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAGCWCTGTKTCA
------TGAGTCA
 A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGCWCTGTKTCA
CCTTGCAATTTTTNN
 A C G T A C G T A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGCWCTGTKTCA
--CCATTGTTTT-
 A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGCWCTGTKTCA
GGGAGGACNG-----
 A C G T A C G T A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAGCWCTGTKTCA-
GHWACAWTGTWDCWA
 A C G T A C T G C G T A A C T G A T G C C G T A G T A C A C G T A C T G A C G T A C G T A C G T A T G C G C T A A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A