Information for 8-ACHBGGTATC (Motif 41)

C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A G T C G T A C T A G C C G A T A C T G A C G T
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.706
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif773.9
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets54.5 +/- 23.2bp
Average Position of motif in Background50.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six3/MA0631.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACHBGGTATC------
GATAGGGTATCACTAAT
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACHBGGTATC------
GATAGGGTATCACTAAT
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACHBGGTATC------
AATAGGGTATCAATTAT
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACHBGGTATC------
GATGGGGTATCATTTTT
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACHBGGTATC------
AATAGGGTATCAATATT
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACHBGGTATC------
AATAGGGTATCATATAT
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACHBGGTATC------
AATGGGGTATCACGTTT
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACHBGGTATC--
GHTACAWTGTADCHR
 A C G T A C G T A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACHBGGTATC--
GHWACAWTGTWDCWA
 A C G T A C G T A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACHBGGTATC------
NNNCTGATATCTCNNNN
 A C G T C G T A G T A C G C T A A T C G A C T G C T A G G C A T G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C