Information for 19-AGAAATCCCAGTA (Motif 37)

C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G A T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T
p-value:1e-6
log p-value:-1.556e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.5 +/- 9.2bp
Average Position of motif in Background47.0 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAAATCCCAGTA
--AAATCACAGCA
 C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGAAATCCCAGTA-
GATAACATCCTAGTAG
 A C G T A C G T C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAAATCCCAGTA
-CAAATCACTG--
 C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGAAATCCCAGTA--
NNNTCCATCCCATAANN
 A C G T A C G T C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAAATCCCAGTA
GGAAANCCCC---
 C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAAATCCCAGTA
GGAAATTCCC---
 C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGAAATCCCAGTA----
--ATTTCCCAGVAKSCY
 C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGAAATCCCAGTA---
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGAAATCCCAGTA
--AAATCACTGC-
 C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGAAATCCCAGTA---
AACTACAATTCCCAGAATGC
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A G T C A G T C A A C G T A G T C A G T C A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C