p-value: | 1e-8 |
log p-value: | -1.993e+01 |
Information Content per bp: | 1.903 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.54% |
Number of Background Sequences with motif | 0.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.2 +/- 9.1bp |
Average Position of motif in Background | 59.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFIX/MA0671.1/Jaspar
Match Rank: | 1 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCAAGCTCTAAACTA CGTGCCAAG---------- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 2 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCCAAGCTCTAAACTA TGCCAA----------- |
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Foxq1/MA0040.1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GCCAAGCTCTAAACTA-- -------AATAAACAATN |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCCAAGCTCTAAACTA ---AGCCACTCAAG-- |
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Klf12/MA0742.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCAAGCTCTAAACTA GACCACGCCCTTATT-- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCCAAGCTCTAAACTA ---AASCACTCAA--- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCAAGCTCTAAACTA GGTGCCAAGT--------- |
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PH0168.1_Hnf1b/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCCAAGCTCTAAACTA----- ----AGCTGTTAACTAGCCGT |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCCAAGCTCTAAACTA ---AAGCACTTAA--- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCCAAGCTCTAAACTA ----NSCACTYVAV-- |
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