Information for 16-TTCATGTTTTAAA (Motif 28)

C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C C G T A A C G T A C T G C G T A C G T A
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.965
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 22.5bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTCATGTTTTAAA
NNGTANTGTTTTNC-
 A C G T A C G T C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TTCATGTTTTAAA--
------ATTTGAATT
 C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCATGTTTTAAA--
NNTTTTGTTTTGATNT
 A C G T C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTCATGTTTTAAA
---CGGTTTCAAA
 C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTCATGTTTTAAA
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTCATGTTTTAAA
ANTNTTACATGTATNTA-
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTCATGTTTTAAA
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCATGTTTTAAA
TTAATGTTTAACC
 C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTCATGTTTTAAA
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTCATGTTTTAAA
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A C G T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T