p-value: | 1e-10 |
log p-value: | -2.339e+01 |
Information Content per bp: | 1.789 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.94% |
Number of Background Sequences with motif | 8.8 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 56.7 +/- 23.4bp |
Average Position of motif in Background | 50.2 +/- 22.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CMACTTACATAGCAAA- --ATTTGCATAACAATG |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CMACTTACATAGCAAA- --ATTTGCATAACAAAG |
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PB0145.1_Mafb_2/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CMACTTACATAGCAAA----- ------CAATTGCAAAAATAT |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CMACTTACATAGCAAA--- ----CCGCATAGCAACGGA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CMACTTACATAGCAAA--- ----TACCATAGCAACGGT |
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PB0119.1_Foxa2_2/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CMACTTACATAGCAAA--- ----AAAAATAACAAACGG |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CMACTTACATAGCAAA --ATTTGCATA----- |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CMACTTACATAGCAAA CTTAACCACTTAAGGAT---- |
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CEBPA/MA0102.3/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | CMACTTACATAGCAAA--- --------ATTGCACAATA |
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PB0148.1_Mtf1_2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CMACTTACATAGCAAA---- ------AAATAAGAAAAAAC |
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