Information for 9-GTCTTCAAAGCCA (Motif 16)

A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A T G C A C G T A C G T A C G T A C T G G T C A C G T A C T A G G T C A A T G C
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.807
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.2 +/- 28.8bp
Average Position of motif in Background53.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCTTCAAAGCCA
CGGTTTCAAA----
 A C G T A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTCTTCAAAGCCA
-ACATCAAAGG--
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCTTCAAAGCCA
---NTCAAGGTCA
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCTTCAAAGCCA
AAAGATCAAAGGAA
 A C G T A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCTTCAAAGCCA--
AAGTTCAAGGTCAGC
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCTTCAAAGCCA
-ACWTCAAAGG--
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTCTTCAAAGCCA
---BTCAAGGTCA
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GTCTTCAAAGCCA-
--------TGCCAA
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCTTCAAAGCCA
-ACATCAAAGGNA
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GTCTTCAAAGCCA
-------CAGCC-
 A T C G A C G T A G T C A C G T A C G T G T A C G T C A G T C A C G T A A T C G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T