Information for 19-CTGAGCAABTTTCTCA (Motif 40)

A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
Reverse Opposite:
C G A T T A C G C T G A C T A G T G C A C G T A C T G A T A G C A C G T A C G T A C T G A G T C A G C T A G T C C G T A A T C G
p-value:1e-6
log p-value:-1.540e+01
Information Content per bp:1.731
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets60.4 +/- 21.8bp
Average Position of motif in Background60.2 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN(var.2)/MA0489.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGCAABTTTCTCA
ATGAGTCATNTNNT--
 A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGAGCAABTTTCTCA
TTGACCTANTTATN--
 A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGAGCAABTTTCTCA
-TGACCTARTT-----
 A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTGAGCAABTTTCTCA
HWWGTCAGCAWWTTT----
 A C G T A C G T A C G T A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGCAABTTTCTCA
AAGTCAGCANTTTTN---
 A C G T A C G T A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGAGCAABTTTCTCA
-TGAGTCA--------
 A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTGAGCAABTTTCTCA
WDNCTGGGCA---------
 A C G T A C G T A C G T A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTGAGCAABTTTCTCA
------CACTTCCTCT
 A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGCAABTTTCTCA
NNVTGASTCATN------
 A C G T A C G T A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTGAGCAABTTTCTCA
NTGAGTCATCN-----
 A T G C A C G T T C A G C T G A C T A G T G A C G T C A C G T A A C T G A G C T A C G T A C G T A G T C A G C T A G T C C G T A
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T A C G T A C G T A C G T A C G T