Information for 13-WCCCTTCSRGGAGRSS (Motif 29)

C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
Reverse Opposite:
A T C G A T G C A G C T A G T C A C G T A G T C A G T C A G T C T A C G A C T G C G T A C T G A A T C G A C T G A C T G C G A T
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 18.9bp
Average Position of motif in Background33.7 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:WCCCTTCSRGGAGRSS
---CTTCCNGGAA---
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:WCCCTTCSRGGAGRSS-
---TTTCCAGGAAATGG
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:WCCCTTCSRGGAGRSS
---TTTCCNGGAAAN-
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:WCCCTTCSRGGAGRSS
---TTTCCAGGAAA--
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WCCCTTCSRGGAGRSS
-NNCTTCCNGGAAGN-
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:WCCCTTCSRGGAGRSS--
---TTTCCTGGAAAGNNN
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:WCCCTTCSRGGAGRSS
---CTTCTGGGAAA--
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WCCCTTCSRGGAGRSS
NGCTTTCTAGGAAN--
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-WCCCTTCSRGGAGRSS
NCCACTTCCGG------
 A C G T C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WCCCTTCSRGGAGRSS
CCACTTCCGGC-----
 C G T A A G T C A G T C A T G C A G C T A C G T A G T C A T G C C T A G A C T G A C T G C G T A A C T G C T G A A T C G T A G C
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T