p-value: | 1e-9 |
log p-value: | -2.207e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 47.4 +/- 19.4bp |
Average Position of motif in Background | 61.1 +/- 29.9bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0060.1_Smad3_1/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCCAGMCAAKMST CAAATCCAGACATCACA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCAGMCAAKMST -BCAGACWA---- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCAGMCAAKMST -CCAGACAG---- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCAGMCAAKMST -CCAGACRSVB-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCAGMCAAKMST ATGCCAGACN----- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCAGMCAAKMST--- -SCAGYCADGCATGAC |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCCAGMCAAKMST- TCCCAGMCRAGCCCC |
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SMAD3/MA0795.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCCAGMCAAKMST CGTCTAGACA----- |
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E2F7/MA0758.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCCAGMCAAKMST TTTTCCCGCCAAAA-- |
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E2F8/MA0865.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCCAGMCAAKMST TTTCCCGCCAAA--- |
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