Information for 9-GGAATTTCCT (Motif 46)

C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T
Reverse Opposite:
C T G A A C T G C A T G C T G A C G T A C T G A G A C T A G C T A T G C G T A C
p-value:1e-6
log p-value:-1.412e+01
Information Content per bp:1.826
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif214.2
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets57.1 +/- 24.9bp
Average Position of motif in Background51.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCCT
GGGAATTTCC-
 A C G T C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCT
GGGAATTTCC-
 A C G T C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCT
GGGGATTTCC-
 A C G T C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCT
GGGGATTTCC-
 A C G T C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GGAATTTCCT---
---ATTTCCTGTN
 C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GGAATTTCCT
NGGGGATTTCCC
 A C G T A C G T C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGAATTTCCT---
---ATTTCCTGTN
 C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGAATTTCCT---
---ACTTCCTGNT
 C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGAATTTCCT---
---ACTTCCTGBT
 C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTCCT
NCTGGAATGC---
 A C G T A C G T A C G T C A T G A T C G C T G A C T G A G A C T A C G T A G C T G T A C G T A C A G C T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T