Information for 22-GARMCCCSGCTTG (Motif 40)

A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G
Reverse Opposite:
A G T C C G T A C T G A A C T G A G T C A T G C A C T G A C T G A C T G A C G T A G T C A G C T A G T C
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.743
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif81.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets41.2 +/- 33.1bp
Average Position of motif in Background45.7 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GARMCCCSGCTTG
GAGSCCGAGC---
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GARMCCCSGCTTG
GGGGCCGAGGCCTG
 A C G T A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GARMCCCSGCTTG-
GACCCCCCGCGAAG
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G A C G T
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GARMCCCSGCTTG-
GACCCCCCGCTGTG
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GARMCCCSGCTTG--
GACCCCCCGCTGCGC
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GARMCCCSGCTTG--
GACCCCCCGCTGTGC
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GARMCCCSGCTTG
---DCTCAGCAGG
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GARMCCCSGCTTG---
-CCACACAGCAGGAGA
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GARMCCCSGCTTG
TATCGACCCCCCACAG-
 A C G T A C G T A C G T A C G T A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GARMCCCSGCTTG----
TACGCCCCGCCACTCTG
 A C T G C T G A T C A G G T C A G T A C T A G C A G T C T A C G C T A G A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G