Information for 10-GGCGCCTCCTGGG (Motif 25)

A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G
Reverse Opposite:
A G T C T A G C A G T C C T G A A C T G A C T G C G T A A C T G A C T G A G T C A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 22.4bp
Average Position of motif in Background45.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCGCCTCCTGGG-
GGCCYCCTGCTGDGH
 A C G T A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCGCCTCCTGGG
-CCCCCTGCTGTG
 A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCGCCTCCTGGG---
-TCNCCTGCTGNGNNN
 A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCGCCTCCTGGG---
-TNTCCTGCTGTGNNG
 A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCGCCTCCTGGG---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCGCCTCCTGGG---
-NNTCCTGCTGTGNNN
 A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCGCCTCCTGGG
--CACTTCCTGT-
 A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G
A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGCCTCCTGGG
NNNGGGGCGCCCCCNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCGCCTCCTGGG
--CACTTCCTGT-
 A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCGCCTCCTGGG----
--RGSMTBCTGGGAAAT
 A C T G A C T G A G T C T A C G A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T