Information for 7-TGCGCAGTCTCCC (Motif 20)

C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C
Reverse Opposite:
A C T G A T C G C T A G G T C A A C T G C T G A A T G C A C G T A C T G A T G C A T C G T G A C G C T A
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.776
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.0 +/- 22.9bp
Average Position of motif in Background52.7 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCGCAGTCTCCC
TGCGCAGGCGC--
 C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCGCAGTCTCCC
TGCCCAGNHW---
 C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCGCAGTCTCCC
-GCTCGGSCTC--
 C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCGCAGTCTCCC
CTGCGCATGCGC--
 A C G T C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCGCAGTCTCCC
GTGCGCATGCGC--
 A C G T C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGCGCAGTCTCCC----
----CTGTCTGTCACCT
 C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCAGTCTCCC-
NTGCTGAGTCATCCN
 A C G T C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGCGCAGTCTCCC-----
-TACGAGACTCCTCTAAC
 C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGCGCAGTCTCCC----
-----TGTCTGDCACCT
 C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:TGCGCAGTCTCCC--
---------TCCCCA
 C A G T A C T G A T G C T A C G G T A C T C G A A T C G G A C T A G T C A C G T A G T C A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A